Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935538.1_cds_XP_016481333.1_72673
CDS Infomation

[gene=LOC107802366] [db_xref=GeneID:107802366] [protein=plant UBX domain-containing protein 11-like isoform X2] [protein_id=XP_016481333.1] [location=complement(join(37010..37095,39165..39425,39589..40084,40161..40367,44658..44725,44803..44868,46413..46494,46599..46651,48062..48161))] [gbkey=CDS]
Sequence

ATGGAGCGACCTTTATCTTCACTTGTGTTCAATGGTTCTATTATAGAAGCCATCGCTGAA
GCCAAGCAGCAGAAGAAGCTTTTTCTGGTTTATGTTTCAGGTGGCAATATGGAATCAAAC
CAATTGGACGCATCAACTTGGCCGGACCCAAGAGTTGCTGATTCTATATCAAAATACTGC
ATTTTGTTGCACATCCTAGAAGAAAGTACTGATGCCAAAAACTTCTCAGCACTGTATCCA
CAGAAGGCCGCCCCTTGTATTACAGCTATTGGATACAATGGTGTTCAACTTTGGCAACAT
GAGGGTTTTGTTTCTGCTGATAATCTTGCATCTAGTCTTGAGAAGGCGTGGTTAAGTCTT
CATGTTCAGGAGACAACAGCTACTTTCTTGACTGCTGCACTTGCTTCAAAGAAAGAGCTT
GTACCTGGAGCTTCTTCTGTAACCTCTGAAGTAGGGAGTTCTTCAAATGCTCAAGTTTCA
TCAGCTCAGGCAGAGACACAGATACAATCTTCAATGGCTACATCGTCTAACAACAATCAG
ATAGTAGAGGAAGAGGACCGTGGACGTGCTGCTACAGAGATAGATTCCTTGGTGATTGAC
ATGGCTTCTCATGGATCAGCTGATGCTTTTGAATCCAGAGTTGGCGAGTTCAATGAGTCT
ACCGGTGCGATCACAATAGCAGAAAAGCCACTTGATCTTGTGGGGGTAGATTCAACCAAG
ACTATAGGTGCATATTCAATGTCAAAAGAGAATCCTGATTTGCATGATCAACTCATGTAT
CCTAATGAGGAAGCTCCCGGAGAGATCGCCAAGAAGGCAAGGAAAGGTCCTGAGATAAAA
ATAGTTGAAGGTGCAGCTGCTGAGAAAGCTGATTTTTCAGATGCCTCGTCAAATAGATCT
CACGATGTTTATTTAAACATTAGATTACCTAGCGGTTCAAGTTTACAAGTGAAGTTCCTT
GTCATGGATACCTTAAGAATGGTCAAGGACTATGTTGATAAAAACCAAACAAGCAGCTTT
GGTTCTTACGATCTAGCAGTTCCTTATCCCCGCAAGGTTTTTGGTGATGGAGATTTAGAT
AGAACATTGTCAGATTTGGGTTTACACAATAGACAAGCACTTATAATCGTTCGTCATAAC
AAAGTGAACGTTACACCATTGCATGGTCAAAGCAGTTCTGCTGAGAGTAACCATTCAGCA
ATTGGATTCAATGAAGGCTATTTTTCTATGATCAGAAGGCTCTTTTCGTATGTGAATCCT
TTATCTTATCTTGGTGGAAGTTCCAACACATCAGACACTGCTCAGGGTTCTCAAAATAGC
ATATGGCAATATGTACTGTCTCCTCATGACATGCAGGTCCAAACCCCACACCTCAGAATA
ATCAGACATTGGCACGTAAACCATACCAAACTCCTATAA

Peptide Sequence

PEP ID

XP_016481333.1
PEP Infomation

PREDICTED: plant UBX domain-containing protein 11-like isoform X2 [Nicotiana tabacum]
Sequence

MERPLSSLVFNGSIIEAIAEAKQQKKLFLVYVSGGNMESNQLDASTWPDPRVADSISKYC
ILLHILEESTDAKNFSALYPQKAAPCITAIGYNGVQLWQHEGFVSADNLASSLEKAWLSL
HVQETTATFLTAALASKKELVPGASSVTSEVGSSSNAQVSSAQAETQIQSSMATSSNNNQ
IVEEEDRGRAATEIDSLVIDMASHGSADAFESRVGEFNESTGAITIAEKPLDLVGVDSTK
TIGAYSMSKENPDLHDQLMYPNEEAPGEIAKKARKGPEIKIVEGAAAEKADFSDASSNRS
HDVYLNIRLPSGSSLQVKFLVMDTLRMVKDYVDKNQTSSFGSYDLAVPYPRKVFGDGDLD
RTLSDLGLHNRQALIIVRHNKVNVTPLHGQSSSAESNHSAIGFNEGYFSMIRRLFSYVNP
LSYLGGSSNTSDTAQGSQNSIWQYVLSPHDMQVQTPHLRIIRHWHVNHTKLL

Transcript Sequence

Gene sequence data has not been registered.